miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Curcuma longa



ABOUT THIS RECORD

ID: MNEST044906
species: Curcuma longa
miRNA family: MIR167
source: microPC, original name: miR167

Taxonomy by NCBI:
Curcuma longa Curcuma Zingiberaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTC

miRNA*
GATCATTATGGCAGTTTCA

mismatches: 3
bulges: 0

View larger
pre-miRNA
TGAAGCTGCCAGCATGATCTCATGATATCCTTCTTTTCTTTTTCTTCTCAATCTCTCCTTTTGAATTTGTTTTCCGAAAAAAATAGATTAAAAATTCTGT
ATATGTAACTAGGTCTAAATGTGAAGGAATCGACGAGATCATTATGGCAGTTTCA


dot-bracket secondary structure
.((((((((((..((((((((.((((.((((((.....((((((....(((..((.......))..)))......)))))).(((((........)))))
......................))))))))))..))))))))..)))))))))).



SIMILARITIES
miRBase osa-MIR167h: 0.00003

PMRD vvi-miR167c: 0.00003

microPC miR167: 4e-35
UniProt no hits

RFAM MIR167_1: 0.0006

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;